PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50297.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 317aa    MW: 34613.1 Da    PI: 5.4919
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.4e-19160210255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta eAa+a+++a+ +++g
  PKA50297.1 160 RYRGVRQRP-WGKFAAEIRDPKRRG--SRVWLGTFDTAVEAARAYDRAAFQMRG 210
                 7********.**********96554..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MSTAFSLFPC INTSSFLPAR SPPSSRPPLS LALCLSMATL DISPLDLIRE HLLGDDPLTP  60
SSTAVPPTCD LTVSDYLEQT EEIYKSPAPA PNPLEGGFRF REPAQSMIRF GGGGHQAQSP  120
RSEFHLTLSI PGAGAAAPKV EWLDGSDGEL RPAELIDGRR YRGVRQRPWG KFAAEIRDPK  180
RRGSRVWLGT FDTAVEAARA YDRAAFQMRG SRAILNFPNE VGSSADWVRP PPPAAATATA  240
TEKRRREEAE AEAEAERAVK REKFLESDWN ISAEGPLTPS IWSAVWEGAD VKELFNLPPL  300
SPLSPHPTLG FPQLMVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-26ERF family protein