PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA49884.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 198aa MW: 21472.1 Da PI: 9.7021 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.9 | 6.9e-20 | 25 | 75 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a++ a+++l+g PKA49884.1 25 TRFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDSAARALRG 75 589*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MRKDRSGEPA TVALTGAPPP TGKETRFRGV RKRPWGRFAA EIRDPWKKTR VWLGTFDSAE 60 DAARAYDSAA RALRGPKAKT NFPPFPSHAS TPAGGQIFTQ PPAPPPRPTS SSMSSTVESF 120 SGPRLSVPRL SSIHIKRPTN PAPPRVLAGD EDCHSDCGSS SSVVDDDDIA SEYRIPLPFD 180 LNLFPPPEDD LQSTALRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 4e-23 | ERF family protein |