PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA49792.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | bHLH | ||||||||
Protein Properties | Length: 78aa MW: 9161.88 Da PI: 9.7269 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.7 | 3.2e-11 | 8 | 48 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++RR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq PKA49792.1 8 QKRRERINKRLKILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 48 79*****************97.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 78 aa Download sequence |
MNELLLVQKR RERINKRLKI LQNLVPNGTK VDISTMLEEA VQYVKFLQLQ IKLLSSDELW 60 MYSPLAFNGM NVWGLDLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14760.3 | 2e-40 | bHLH family protein |