PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA49765.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 230aa MW: 25155.5 Da PI: 6.9636 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.8 | 8.7e-16 | 43 | 92 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+ + +grWvAeI+ ++ r +lg+f+tae Aa+a+++a+ l+g PKA49765.1 43 RFMGVRQSP-SGRWVAEIKG----TaQKIRLWLGTFDTAEAAARAYDEAACLLRG 92 689******.7******655....2457**********************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MAGKKIAPTS AGIRKKKPAA PEKTHQVFFS GAGEKLQPPS QKRFMGVRQS PSGRWVAEIK 60 GTAQKIRLWL GTFDTAEAAA RAYDEAACLL RGANTRTNFW PRSASVSSAL PAKVLNILIH 120 HLESQRAAQS PPPPPPPSSS LLPPPVTPAE LTARYLDYSG QFPSDASTTD HSGDEEMERA 180 LDFMNMTLGL DEIDESLTSF YEPPEMAAVT EEASMGVEIV KYFERRFSFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 3e-21 | ERF family protein |