PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA49332.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 461aa MW: 52722.8 Da PI: 5.7697

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA49332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.5	2.8e-49	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGf FhPtd elv++yL++k g ++++ evi+e+diyk ePwdLp+ ++ +++++w+fF++rd+ky++g+r+nrat++gyWk+tgkd+++ ++ PKA49332.1 9 LPPGFGFHPTDVELVSHYLRRKNLGLEVDF-EVIPELDIYKREPWDLPAccRIPTKDSKWHFFTSRDRKYPNGSRSNRATEAGYWKSTGKDRKIRF-QN 105 79***********************999.99***********6457777999*********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g+kktLvf++gr p g++tdW+mhey + PKA49332.1 106 RVIGTKKTLVFHEGRPPCGKRTDWIMHEYYM 136 99*************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MEALKAIALP PGFGFHPTDV ELVSHYLRRK NLGLEVDFEV IPELDIYKRE PWDLPACCRI 60 PTKDSKWHFF TSRDRKYPNG SRSNRATEAG YWKSTGKDRK IRFQNRVIGT KKTLVFHEGR 120 PPCGKRTDWI MHEYYMDEKE SKVTPRMKDT YVLCRITKRN GLEMEGEDVV TLTDGVEDLH 180 KEVKNLDTKV QEVMLQEESS PSESTEDLDA WLNELFDPNF NGPVDFTFTG LPSFAEPKSE 240 ILVSKLPNTA VMSSANQIHE SFASQAVLTT PKVEPLDYGF LLDENIGILH DDFKDMPDIA 300 ELLAVDPQSS IGTERSLPEN EKLTGIMIRE HIGRPTSETF NHRIELQLQT SKMESRNSTS 360 VSHTVNFAHA NQRISSSRRF QHPRKVDAGK KLEYRETGQN CIYSFMGELW NFISWCSTAG 420 MDSCFLCVCI IGTAALFLFF LFHDCRSFLE SFLESFLALG L

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MEALKAIALP PGFGFHPTDV ELVSHYLRRK NLGLEVDFEV IPELDIYKRE PWDLPACCRI  60
PTKDSKWHFF TSRDRKYPNG SRSNRATEAG YWKSTGKDRK IRFQNRVIGT KKTLVFHEGR  120
PPCGKRTDWI MHEYYMDEKE SKVTPRMKDT YVLCRITKRN GLEMEGEDVV TLTDGVEDLH  180
KEVKNLDTKV QEVMLQEESS PSESTEDLDA WLNELFDPNF NGPVDFTFTG LPSFAEPKSE  240
ILVSKLPNTA VMSSANQIHE SFASQAVLTT PKVEPLDYGF LLDENIGILH DDFKDMPDIA  300
ELLAVDPQSS IGTERSLPEN EKLTGIMIRE HIGRPTSETF NHRIELQLQT SKMESRNSTS  360
VSHTVNFAHA NQRISSSRRF QHPRKVDAGK KLEYRETGQN CIYSFMGELW NFISWCSTAG  420
MDSCFLCVCI IGTAALFLFF LFHDCRSFLE SFLESFLALG L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	3e-66	NAC family protein