PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA49229.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family AP2
Protein Properties Length: 349aa    MW: 38802.3 Da    PI: 5.5605
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA49229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-17131180155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta+ Aa+a+++a+ k++g
  PKA49229.1 131 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAQAAARAYDRAAIKFRG 180
                 78*******************......55************************997 PP

2AP242.71.4e-13223273155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+++GV+ +k  grW+A++  +     +k+++lg f+t+ eAaka+++a+ k +g
  PKA49229.1 223 SKFRGVTLHK-CGRWEARLGQF--L-GKKYVYLGLFDTEVEAAKAYDKAAIKCNG 273
                 79********.7******5553..1.26**********99**********99776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MWDLNGLPDR EGVPAWPAED CSSGGGEATD NSSSSIIIVE ATDGGNSGGF MGLSIAGTGQ  60
DESYSAESEF VITRQFFPIN ELPPETPPLA AKANWLGWKL PDPTAGAASA KALEASQTIK  120
KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAQAAARA YDRAAIKFRG  180
VEADINFSLS DYEEDLKQMG NLTKEEFVHV LRRQSTGFPR GSSKFRGVTL HKCGRWEARL  240
GQFLGKKYVY LGLFDTEVEA AKAYDKAAIK CNGKDAVTNF DPKIYEEEIN FSRDDNDHNL  300
ELTLGNFSSK RSNLVQMEEE GPTAMDQRAP MDLEPEWMRN IRPKVLKNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.11e-104AP2 family protein