PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA48733.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

CPP

Protein Properties

Length: 549aa MW: 59859.1 Da PI: 8.4565

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA48733.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.7	2.7e-14	99	136	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +kk+CnCk+s+Clk+YCeCfa+g++C+ C+C +C N+ PKA48733.1 99 RKKNCNCKHSRCLKLYCECFASGVYCDG-CNCANCYNNV 136 689***********************.******96 PP
2	TCR	51	2.8e-16	183	222	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e PKA48733.1 183 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 222 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MEQGIKSASP GSSDCPPKKL VRQLDFTSEN CGAPTAPVVA RPLLGDQRPM PLLLLQQHKQ 60 MHAPVLPISS PSISVSTKPE SPKIRPRPLF EMKEVTPTRK KNCNCKHSRC LKLYCECFAS 120 GVYCDGCNCA NCYNNVGNEA ARHDAVEATL ERNPNAFRPK IGNSPHKIRD DKEDIGEVAL 180 VGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCKCMDCKN FEGSEERKAL FHGEHGNAIT 240 FTQQPASAAL NGATSPSLYN SPASKKRKNL DLLFGSSAKD QSFHRLAQFP QVSQLKSSGL 300 AHFASIPTVR AANQASLGPL KVTYRPLLAD IIHPEDIKKL CRILVVVSGE AANTTAVKKM 360 QEEKIPGIEE HIDSSLASSS HEVSKDLDVW NASLDDRLSG THADKMSPET SHSDSADGQK 420 AGRPVSPGTL ALMCNEQDMV FLKSKEPNLA PKYAGNHNSM EVRVEQEKCV LMAFRESLRK 480 LVNCGIAKEV KFSSLKAETS GHHEPVSNSS AIIPASGAKQ VSQSINAFNS SKYNRVPLRV 540 GNETVENEN

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MEQGIKSASP GSSDCPPKKL VRQLDFTSEN CGAPTAPVVA RPLLGDQRPM PLLLLQQHKQ  60
MHAPVLPISS PSISVSTKPE SPKIRPRPLF EMKEVTPTRK KNCNCKHSRC LKLYCECFAS  120
GVYCDGCNCA NCYNNVGNEA ARHDAVEATL ERNPNAFRPK IGNSPHKIRD DKEDIGEVAL  180
VGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCKCMDCKN FEGSEERKAL FHGEHGNAIT  240
FTQQPASAAL NGATSPSLYN SPASKKRKNL DLLFGSSAKD QSFHRLAQFP QVSQLKSSGL  300
AHFASIPTVR AANQASLGPL KVTYRPLLAD IIHPEDIKKL CRILVVVSGE AANTTAVKKM  360
QEEKIPGIEE HIDSSLASSS HEVSKDLDVW NASLDDRLSG THADKMSPET SHSDSADGQK  420
AGRPVSPGTL ALMCNEQDMV FLKSKEPNLA PKYAGNHNSM EVRVEQEKCV LMAFRESLRK  480
LVNCGIAKEV KFSSLKAETS GHHEPVSNSS AIIPASGAKQ VSQSINAFNS SKYNRVPLRV  540
GNETVENEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-151	CPP family protein