PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA48555.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Dof

Protein Properties

Length: 326aa MW: 34062 Da PI: 9.0241

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA48555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.4	3.7e-39	66	126	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e alkcprCdstntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ PKA48555.1 66 PEPALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 126 67899*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MVFSSLPVYL DPPNWNQQLS HQPPSSVGNV DHSQHIPPPP PLPPPAGSAR PVSMAERARL 60 AKIPQPEPAL KCPRCDSTNT KFCYFNNYSL SQPRHFCKTC RRYWTRGGAL RNVPVGGGCR 120 RNKRSKPSGT SSKSLSSVSA ATGASSSSTA ASGSTTSSIL PPPQLPFLPS FQPLNDYSAN 180 IGLNFAGIHP VDSIDYQLGS GGGLGLEQWR LQQIQQFPFL GGLESSPAAA PPSAPITGLF 240 PFDGEGSSGG EGFSAQILPR ASNSGLISQL AAVKMEDSSH GMNMPRHFDQ YWGSSGGGGS 300 SGNGGGGGWP AGDIPGFHSS SSGNML

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	120	127	RRNKRSKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	2e-45	Dof family protein