PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA48511.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | NF-YB | ||||||||
Protein Properties | Length: 126aa MW: 14399.5 Da PI: 8.1869 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 182.1 | 4.5e-57 | 20 | 114 | 1 | 95 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrflPian+srimkk+lP n+ki+kdaketvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy+eplk+yl+kyre+ + PKA48511.1 20 VREQDRFLPIANISRIMKKALPPNGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKLYLQKYREVMN 114 69******************************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence |
MASETPASPE SGEQSPKSNV REQDRFLPIA NISRIMKKAL PPNGKIAKDA KETVQECVSE 60 FISFITSEAS DKCQKEKRKT INGDDLLWAM ATLGFEDYIE PLKLYLQKYR EVMNSRLKRN 120 DQLLIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38880.6 | 3e-66 | NF-YB family protein |