PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA48425.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 322aa    MW: 37192.8 Da    PI: 6.9277
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA48425.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.87.1e-5671361129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPtdeelv++yLkkkve++++++ +vik++d+yk+ePwdL+   k+ + e++ewyfFs++dkky+tg+r+nrat+ g+Wkatg+dk+++s k
  PKA48425.1   7 VPPGFRFHPTDEELVDYYLKKKVESRRIDV-DVIKDIDLYKIEPWDLRGrcKIGEeEQNEWYFFSHKDKKYPTGTRTNRATNVGFWKATGRDKPIYS-K 103
                 69****************************.9***************952444442555**************************************.8 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrle 129
                 ++l+g++ktLv+ykgrap+g+k+dW+mheyrle
  PKA48425.1 104 NSLIGMRKTLVYYKGRAPNGQKSDWIMHEYRLE 136
                 899****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MNNLSHVPPG FRFHPTDEEL VDYYLKKKVE SRRIDVDVIK DIDLYKIEPW DLRGRCKIGE  60
EEQNEWYFFS HKDKKYPTGT RTNRATNVGF WKATGRDKPI YSKNSLIGMR KTLVYYKGRA  120
PNGQKSDWIM HEYRLETNEK GHPQEEGWVV CRVFKKKAAA TTTTTTIAIK RLTDHGSPSW  180
FDESSPFILE ANSPKRNTAD LQHSDHLHVL HCKSELELQA LPHHLPQDPS FLQLPQLESP  240
KLPNCIFTEL APTQNGQQLQ ILTVFSEEEH VTDWRIFDKL VASQLSHDAN SSSAFHVSDK  300
QESAPLEYAS TSTSSEQIEL WK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-102NAC family protein