PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA47746.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 249aa MW: 27134.1 Da PI: 4.8944 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.1 | 7.9e-17 | 42 | 90 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 ++GVr++ +g+Wv+eIr+p+ + r++lg++ ++e+Aa+a++ a+++l+ge PKA47746.1 42 FRGVRRR--SGKWVSEIREPR----KaNRIWLGTYPSPEMAAAAYDVAALALRGE 90 89**854..6*********95....358*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MADPPIPPPP RSVPPHSPDD LHSSSSPAAA AAAASTSPTG SFRGVRRRSG KWVSEIREPR 60 KANRIWLGTY PSPEMAAAAY DVAALALRGE DAVLNFPDAA RLRQPPASAS PTDIQAAAAA 120 AAAEWAVKFK DDGASRPSPE ANEERNWERF FDEEEMLHLP QLLVSMAEGM MMSPPRLSSP 180 ESDNSPEVSE GENLWIFDEH RNSNHRPRCL VEPQNIDHEI TATALPIIGY DSNVHTIFHD 240 VSPNSFKTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 1e-37 | ERF family protein |