PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA47646.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 261aa MW: 28894.7 Da PI: 5.9419 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.9 | 1.1e-17 | 111 | 161 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr++ +g+++AeIrd r r++lg+f+ta eAa+a+++a+ k++g PKA47646.1 111 RYRGVRRRT-WGKFAAEIRDlK-R---RgSRIWLGTFDTAVEAARAYDRAAFKMRG 161 7*****877.**********44.3...24*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MPAKAISALD LIREHLLGDE APSFVLDGGL SSFPIPLASA VPTDPVVDIT VSDNLEPTGV 60 FGGDFRFRDS AEAMIRFPLT LNIPQADAPK VQLLEGSVGT LRQPNLFDFR RYRGVRRRTW 120 GKFAAEIRDL KRRGSRIWLG TFDTAVEAAR AYDRAAFKMR GRRAILNFPN EVGGSADWIS 180 QESAREKKGR DETEAEAVAD RDVLKRERSE ESEWSIPAEW PLTPSTWSAV LEGADTKGLF 240 SLPPLSPLSP HPPPGFPQRL T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 7e-23 | ERF family protein |