PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA47433.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

FAR1

Protein Properties

Length: 837aa MW: 95899 Da PI: 7.9329

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA47433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	87.7	1.7e-27	36	123	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YA++vGF vr+s+ ++++n +t+rtfvCs+eg+re++k + ++ +++r+etr+gC+a+++++++++gk++vt++ ++HnH+la PKA47433.1 36 EFYGTYAENVGFFVRRSTLWTTSKNI-VTRRTFVCSREGFREKKKGA-KEVKSPRPETRIGCQACMTIRLTSNGKYRVTEFISNHNHPLA 123 6******************97766.************9999.9999**********************************97 PP
2	FAR1	82.1	9.6e-26	165	252	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+ YA ++GF+vr+++++ + ++ it+r fvCskeg+re++k + ++ +++r+etrtgC a++ ++ +++gk++v+++++ HnH+la PKA47433.1 165 EFYSMYAGRMGFTVRRASMTVT-AENVITRRMFVCSKEGFRERKKGA-KRVKKPRPETRTGCPACMIIRITTSGKYHVSEFVTCHNHSLA 252 6**************99998.5566************9998.99************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 837 aa Download sequence
MANITASTSL TTGENRNPEW MPSVNMLFDS ENDAYEFYGT YAENVGFFVR RSTLWTTSKN 60 IVTRRTFVCS REGFREKKKG AKEVKSPRPE TRIGCQACMT IRLTSNGKYR VTEFISNHNH 120 PLATSTSIQM LRAKKLRRKA RAARVDLVDD SVKTPEFETE DEAYEFYSMY AGRMGFTVRR 180 ASMTVTAENV ITRRMFVCSK EGFRERKKGA KRVKKPRPET RTGCPACMII RITTSGKYHV 240 SEFVTCHNHS LATPSNDFSV PRFAENGALD DELDMTDGLM MTPISTDNSV SIQARTSHDL 300 GIHSVDSKCS LRSKRIKSVQ VGDIGATLEY LQKMQDDSPS FFYTIQVDEV DNMTNFFWTD 360 AKSVVDFSYF GDVLCFDTSY KYFGYGRPFA LFVGLNHHKQ LVIFGSALLY DESKKSYKWL 420 FDAFKTAMGG KQPKTILTDR NALQVEALAE MWPGIVHRFC VWHIYQNALE HLSQAFHGSK 480 TLESDFSRCL FDYDNEEEFL VAWKVMLEIY DLKDNQWLAS LFEEREKWAL VYGREAFYGD 540 MKSIQLKDNL TSELKKHLSP ETELLCFYEH YVRLLDDRRS AEVLSDAQAS QSARKLPSMR 600 VLRQAANAYT PAAFKMFERE FELYMDCMLY SCGNVGTISE YKVTIDEKPS HFVKFDSLDN 660 SITCSCKKFQ FIGIPCHHVL KVLDSRNIKD LPPEYVLKRW RKDAKVEAFS GSYEFPFDGD 720 PQTSSAKRYS YLCRIFNIVA SRAAKSLDTF AFVENQSDIL MEQVEQLLRT RAPEMPPFIT 780 SPCERAQSSV EPIVNGGFRH DRVNQVNFLG PANGFLSTRI SHPTICWGQF PAGPPEQ

Sequence ? help Back to Top

Protein Sequence Length: 837 aa Download sequence

MANITASTSL TTGENRNPEW MPSVNMLFDS ENDAYEFYGT YAENVGFFVR RSTLWTTSKN  60
IVTRRTFVCS REGFREKKKG AKEVKSPRPE TRIGCQACMT IRLTSNGKYR VTEFISNHNH  120
PLATSTSIQM LRAKKLRRKA RAARVDLVDD SVKTPEFETE DEAYEFYSMY AGRMGFTVRR  180
ASMTVTAENV ITRRMFVCSK EGFRERKKGA KRVKKPRPET RTGCPACMII RITTSGKYHV  240
SEFVTCHNHS LATPSNDFSV PRFAENGALD DELDMTDGLM MTPISTDNSV SIQARTSHDL  300
GIHSVDSKCS LRSKRIKSVQ VGDIGATLEY LQKMQDDSPS FFYTIQVDEV DNMTNFFWTD  360
AKSVVDFSYF GDVLCFDTSY KYFGYGRPFA LFVGLNHHKQ LVIFGSALLY DESKKSYKWL  420
FDAFKTAMGG KQPKTILTDR NALQVEALAE MWPGIVHRFC VWHIYQNALE HLSQAFHGSK  480
TLESDFSRCL FDYDNEEEFL VAWKVMLEIY DLKDNQWLAS LFEEREKWAL VYGREAFYGD  540
MKSIQLKDNL TSELKKHLSP ETELLCFYEH YVRLLDDRRS AEVLSDAQAS QSARKLPSMR  600
VLRQAANAYT PAAFKMFERE FELYMDCMLY SCGNVGTISE YKVTIDEKPS HFVKFDSLDN  660
SITCSCKKFQ FIGIPCHHVL KVLDSRNIKD LPPEYVLKRW RKDAKVEAFS GSYEFPFDGD  720
PQTSSAKRYS YLCRIFNIVA SRAAKSLDTF AFVENQSDIL MEQVEQLLRT RAPEMPPFIT  780
SPCERAQSSV EPIVNGGFRH DRVNQVNFLG PANGFLSTRI SHPTICWGQF PAGPPEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-116	FAR1 family protein