PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA47171.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 190aa MW: 20637.1 Da PI: 9.7523 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.3 | 3e-21 | 47 | 96 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrd ++ ++r +lg+f+taeeAaka+++a+++l+g PKA47171.1 47 HYRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAAKAYDEAARNLRG 96 69*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MMAVDTLRLG KGSGAVCVSV GGEEKLPAGA TSAVTAVTAG SGAKEGHYRG VRKRPWGRFA 60 AEIRDPWKKT RKWLGTFDTA EEAAKAYDEA ARNLRGPKAK TNFGTGDSAG ADGEAIWRPN 120 QWRSAFTDAR DLFLASPAAA SGEYSGYRYD AVEVMVRSEQ EKKMRSVISK EDENSKKAFA 180 FDLNLPPPHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28360.1 | 3e-23 | ERF family protein |