PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA47073.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 185aa MW: 20155.6 Da PI: 8.4647 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.5 | 1e-15 | 15 | 64 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr +k +g Wv+e+r p++ r r++lg+++++e+Aa+a +aa l+g PKA47073.1 15 RYKGVRKRK-WGAWVSEVRLPNS---RERIWLGSYDSPEKAARAFDAASFFLRG 64 69****999.*******999833...5*********************999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MSPTKGGGGG GAEGRYKGVR KRKWGAWVSE VRLPNSRERI WLGSYDSPEK AARAFDAASF 60 FLRGRRAGLN FPDRTPDIAI AASGRRAATP RQIQAAAARY AHSVPSPRGK RPAAESVMLR 120 AEEETEPPPP ATPVNWSLLE MMAPPDFPAA EEFGYEWHPS TVAEEEVELA ECGGPFASSS 180 ILWNF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 17 | 23 | KGVRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74930.1 | 1e-31 | ERF family protein |