PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA46867.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 389aa MW: 43687.6 Da PI: 5.1837

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA46867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.3	2.6e-31	119	172	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ PKA46867.1 119 PRLRWTPDLHLSFVHAVEMLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 172 8****************************************************7 PP
2	Myb_DNA-binding	47.5	4.2e-15	120	171	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ g++ ++ks++q+y+ PKA46867.1 120 RLRWTPDLHLSFVHAVEMLGGQeraTPKLVLQLMNvRGLSIAHVKSHLQMYR 171 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MEIRGEKGKK IMVENYRDEE EMKRPTPELD LNNVIFVEGN RPGSKAKEEE EEEEEEEEEE 60 EEEDEEDKGS TTGVQGGSSS DSNYGDGSSS TSSKSKGAGE GSGGRPSPAV RQYVRSKMPR 120 LRWTPDLHLS FVHAVEMLGG QERATPKLVL QLMNVRGLSI AHVKSHLQMY RSKKLDDSGQ 180 VRSINSSALS PLDLQLRKIR LHEMLYRGAA AGSCHHPFRS SMETNGSFIR GESIQDANDR 240 VYSSLGLQYY HHQKPLNFSN DSFRYNEINR SLFDDLTMNK EGIADIQKVE NVIIERKRKL 300 LTRESEAMLD LQLSLSSSST NNGVLNDGER YADEKESIYS ELSLSLSPPS RENQNSFKMG 360 DELFKMSSRS KKPSVGLIST TLDLTMSIT

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MEIRGEKGKK IMVENYRDEE EMKRPTPELD LNNVIFVEGN RPGSKAKEEE EEEEEEEEEE  60
EEEDEEDKGS TTGVQGGSSS DSNYGDGSSS TSSKSKGAGE GSGGRPSPAV RQYVRSKMPR  120
LRWTPDLHLS FVHAVEMLGG QERATPKLVL QLMNVRGLSI AHVKSHLQMY RSKKLDDSGQ  180
VRSINSSALS PLDLQLRKIR LHEMLYRGAA AGSCHHPFRS SMETNGSFIR GESIQDANDR  240
VYSSLGLQYY HHQKPLNFSN DSFRYNEINR SLFDDLTMNK EGIADIQKVE NVIIERKRKL  300
LTRESEAMLD LQLSLSSSST NNGVLNDGER YADEKESIYS ELSLSLSPPS RENQNSFKMG  360
DELFKMSSRS KKPSVGLIST TLDLTMSIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-36	G2-like family protein