PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA46580.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Protein Properties

Length: 359aa MW: 38963.6 Da PI: 8.6244

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA46580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	95.5	3.5e-30	78	181	1	98
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelv 93 f+kv tpsdv+k++rlv+pk++ae++ ++ +e++ l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F + g s+ +l+ PKA46580.1 78 FEKVVTPSDVGKLNRLVIPKQHAEKFfpldSSAHEKGLLLCFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGvGVaSRDRLF 176 99*************************977778999**********************************************9554666777777 PP EEEE- CS B3 94 vkvfr 98 + + r PKA46580.1 177 IDWKR 181 77666 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MEFTSGRRNN RYSSEEEDVE RDQRSVSDGA VRRSHTFPSG SSSPIPLRWA DASSAETSSS 60 AAAPPEQPAQ AIEKEQMFEK VVTPSDVGKL NRLVIPKQHA EKFFPLDSSA HEKGLLLCFE 120 DRNGKPWRFR YSYWNSSQSY VMTKGWSRFV KEKRLDAGDT VSFGRGVGVA SRDRLFIDWK 180 RRPDPHLHPS SLPIPRFPCH ASPSSSTGGP AAAHHPYISF ARSPGTPWSA SRIFLPQALP 240 PPAPGAGSYF CFRSASQNSL PQPVRSGAVP AAMVLDSIPV AHGLAAGKRL RLFGVNLDCP 300 EQHVNADEAE ASGELDLQLG SPLPTAADLR LGGPVVESSS SSSSRGGKNP HSPPLDLEM

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MEFTSGRRNN RYSSEEEDVE RDQRSVSDGA VRRSHTFPSG SSSPIPLRWA DASSAETSSS  60
AAAPPEQPAQ AIEKEQMFEK VVTPSDVGKL NRLVIPKQHA EKFFPLDSSA HEKGLLLCFE  120
DRNGKPWRFR YSYWNSSQSY VMTKGWSRFV KEKRLDAGDT VSFGRGVGVA SRDRLFIDWK  180
RRPDPHLHPS SLPIPRFPCH ASPSSSTGGP AAAHHPYISF ARSPGTPWSA SRIFLPQALP  240
PPAPGAGSYF CFRSASQNSL PQPVRSGAVP AAMVLDSIPV AHGLAAGKRL RLFGVNLDCP  300
EQHVNADEAE ASGELDLQLG SPLPTAADLR LGGPVVESSS SSSSRGGKNP HSPPLDLEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	7e-68	B3 family protein