PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA46330.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 364aa    MW: 40167.7 Da    PI: 6.8423
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA46330.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH53.35e-174998255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h++ E+rRR++iN++f+ Lr llP++    ++K +Ka+ L +++eYI+ Lq
  PKA46330.1 49 RSKHSATEQRRRSKINDRFQILRGLLPNS----DQKKDKASFLLEVIEYIQFLQ 98
                889*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MESASRFSKG FEDDDEDEEE LGKREGSSLK ELTVMVDGKS SDHMACTPRS KHSATEQRRR  60
SKINDRFQIL RGLLPNSDQK KDKASFLLEV IEYIQFLQEK VQKYESLYPG WNDENTKLMP  120
WVKVYFRSFW KNSRNNHHCS SDGMVDPQSA KNAAAPCYVI SENNIPVPPS VLSSAQNPAE  180
TDLRAGVCYK EIEHHSGFAG KVAAAPPSFQ PNIYPMIGRG NGVGQPLHRL ISEVDNLASP  240
SHWSRPTSLA DCSVSSDMLN EQEELTIDEG TINVSSAYSQ GLLNTLSQAL QNSGIDLAQA  300
SISVHINLGR RSGSKHNVST SLTTAKNKDE HPLLSSNLSI GPARTGSRSD EFGQAAKRHK  360
SVHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.19e-61bHLH family protein