PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA46132.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 197aa MW: 21680.7 Da PI: 10.415 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.7e-19 | 15 | 65 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++ GVr+++ +grWvAeI+d s +r r +lg+f+t+eeAa+a+++a++ l+g PKA46132.1 15 CRFVGVRQRP-SGRWVAEIKDSS---QRIRLWLGTFDTPEEAARAYDEAARVLRG 65 6899******.7*********43...36**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MASGDKKLKS GDRRCRFVGV RQRPSGRWVA EIKDSSQRIR LWLGTFDTPE EAARAYDEAA 60 RVLRGDNTRT NFTPPAGSGS ACCGGVSRLH GCDVDLSGEK ARLSRSIRSI IARSMAESRM 120 AARARVSDHL TLASIFHPQR ITAAPAETEK LWPWEHGVVE ADGGWEEMKE RMKKFKVSSS 180 VIVPPSFSAS PAPEKIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 7e-21 | ERF family protein |