PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA46063.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ARR-B | ||||||||
Protein Properties | Length: 683aa MW: 73658.2 Da PI: 6.5055 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90.3 | 1.7e-28 | 231 | 284 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl PKA46063.1 231 KPRVVWSVELHQQFVNAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 284 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 41.3 | 3.6e-13 | 233 | 283 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v+av+qlG + +k+I + m+ g+t++++ s++qk++ PKA46063.1 233 RVVWSVELHQQFVNAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQKFR 283 678**********************************************97 PP | |||||||
3 | Response_reg | 78.7 | 2e-26 | 46 | 154 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+ + +++l+ +l k +y +v++++++++al ll+e++ +D+++ D+ mp+mdG++ll+ e++lp+i+++a g + + + +k Ga PKA46063.1 46 VLVVDDDVTCLKILEHMLHKCRY-RVTTCSQATKALSLLRERKggFDVVISDVHMPDMDGFKLLELVGL-EMDLPVIMMSADGRTSAVMRGIKHGAC 140 89*********************.***************999999*******************87754.558************************ PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +eel + PKA46063.1 141 DYLIKPVRIEELKN 154 ***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 683 aa Download sequence |
MAAMQKLAAP SASTGSSYGS CRADATDAVS AAPGAAQEQF PVGMRVLVVD DDVTCLKILE 60 HMLHKCRYRV TTCSQATKAL SLLRERKGGF DVVISDVHMP DMDGFKLLEL VGLEMDLPVI 120 MMSADGRTSA VMRGIKHGAC DYLIKPVRIE ELKNIWQHVI RKKWNENKDV EHSGSLEDSD 180 CHRRVADDAE YASSVNNGLD SSWKTQKKKR DTKEEEDEGE LENDDPSTSK KPRVVWSVEL 240 HQQFVNAVNQ LGIDKAVPKR ILELMNVPGL TRENVASHLQ KFRLYLKRLS GVAQHQSALP 300 NPFCSHVETN AKVGSLGRLD FQSLAASGQI PPQTLAALHA ELLGRPSGSL LLPAVDQPVV 360 LQTSSQGSKC LPVEREVGFC QPLFKCQSET SKQFPPTEIN VQEISSTLSS WPSTRPSTQL 420 GGLSDTQNSN LLMQMLQKQQ KQQPLYPVVS DSHNAINVQP SCLVVPSQLP SCLNQNAMVA 480 SFQLGSNNVL ANSNSSLDSG ISYDYGILSP QTNNVPLGMG QVSDGHFKST GPLNSCISPA 540 SVPTSVASSS IYAGHGAGWR SPNSDLNIGS ASRLPGHLPN VSIQSSDVNL GISVSQGQVK 600 NLGFVGKGTC LPSRFAVDDI ESPTNDQSNV KGSLFDVVNK VKQELNLDFL DGSQVGSSVT 660 NFPSSDFMGV LSKDSQAGCF LSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-118 | ARR-B family protein |