PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA45961.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family BBR-BPC
Protein Properties Length: 335aa    MW: 37555.5 Da    PI: 10.1404
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA45961.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind359.66.6e-11013351301
   GAGA_bind   1 mdddgsre..rnkg.yye........paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllve 88 
                 mdd+g+re  r+k+ +y+        p++++k+  +++lm+++aerd++i+ern+al+ekk a+a+rd+a lqrd+a+aern a++erdn+l+al++++
  PKA45961.1   1 MDDNGQREngRHKAdHYKqvhaqwmmPQHQIKDSHTMKLMQIMAERDNAIQERNAALQEKKTALADRDIAILQRDAAIAERNTAIMERDNALAALEYAR 99 
                 99***99999****99999*999999778*******************************************************************988 PP

   GAGA_bind  89 nslasalpvgvqvlsgtksidslqqlse.....pqledsave.lreeeklealpieeaae.eakekkkkkkrqrakkpkekkakkkkkksekskkkvkk 180
                 ++++  ++ + ++ +g+k+ ++ + +++      ql++s++   r+++ +ea+p +ea + ++ +++k+k  ++ k+ k++ a+  kk s++++k +k+
  PKA45961.1 100 ENSM--NGGTNSAPRGAKHFHQQHLQQHlqhppLQLSESPYIhERDMHVTEAYPFSEALDgNTVKVRKPK--RSRKEGKAQAANPSKKASKAPRKGKKN 194
                 8755..3333444455555554444333444678999*999889**********9997651344444444..444444444444444433333333333 PP

   GAGA_bind 181 esader.....................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagr 258
                  + d +                     +++e+k +dl+ln+v++Dest+P+P CsCtG+l+qCYkWGnGGWqSaCCttt+S+yPLPv++++r+aR+agr
  PKA45961.1 195 GGGD-DlnkqvtiakpltewrgdvigtKHHEWKGQDLGLNQVTFDESTMPPPGCSCTGKLQQCYKWGNGGWQSACCTTTMSIYPLPVMPNKRHARVAGR 292
                 3222.12356899*************9999********************************************************************* PP

   GAGA_bind 259 KmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 KmS++af+klL++LaaeG+dls +vDLkdhWAkHGtn+++ti+
  PKA45961.1 293 KMSGSAFTKLLSRLAAEGHDLSAAVDLKDHWAKHGTNRYITIK 335
                 ******************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MDDNGQRENG RHKADHYKQV HAQWMMPQHQ IKDSHTMKLM QIMAERDNAI QERNAALQEK  60
KTALADRDIA ILQRDAAIAE RNTAIMERDN ALAALEYARE NSMNGGTNSA PRGAKHFHQQ  120
HLQQHLQHPP LQLSESPYIH ERDMHVTEAY PFSEALDGNT VKVRKPKRSR KEGKAQAANP  180
SKKASKAPRK GKKNGGGDDL NKQVTIAKPL TEWRGDVIGT KHHEWKGQDL GLNQVTFDES  240
TMPPPGCSCT GKLQQCYKWG NGGWQSACCT TTMSIYPLPV MPNKRHARVA GRKMSGSAFT  300
KLLSRLAAEG HDLSAAVDLK DHWAKHGTNR YITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-106BBR-BPC family protein