PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA45785.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YA
Protein Properties Length: 321aa    MW: 35274.1 Da    PI: 9.1097
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA45785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA97.91.1e-30156209458
   CBFB_NFYA   4 lYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +YVNaKQy++I++RR++Rak+e  +kl ++ rkpylheSRh hA+rRpRg+gGrF
  PKA45785.1 156 IYVNAKQYHGIVRRRKARAKAEMANKL-IQVRKPYLHESRHLHAMRRPRGCGGRF 209
                 9**************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MQNMVFVDNN GRNGQISLVQ PTQPSLVPWW LGCQPLYGES CNQFKALSGD PLKAASGQVN  60
HVVDGRMRGI QEKGEGGCDS SKFPEILGKV QNSQQHFITL SLQSPPNCQI ELGLGQSTVC  120
TNYPYIDQCY GLFASDRAQA AGRILLPLSM TGDGLIYVNA KQYHGIVRRR KARAKAEMAN  180
KLIQVRKPYL HESRHLHAMR RPRGCGGRFL NTKKDANTQT VDQLTNPEYY NPPSRPASST  240
GFELLQSNMV NPNSVSCHLS LSGAKASIMY SQGNSDHFHI TDHLHPSLFR PLASMISGNQ  300
GSDITSKWGV ATDGCCNLLK V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.23e-35NF-YA family protein