PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027369127.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 846aa    MW: 94193 Da    PI: 6.4183
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027369127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.72.3e-23127228199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_027369127.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 217
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_027369127.1 218 KNQLLLGIRRA 228
                     9999****997 PP
2Auxin_resp120.81e-39253336183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+v+YnPras+seFv++++k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_027369127.1 253 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 336
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 846 aa     Download sequence    
MKLSTSGLGQ QGHEGEKKCL NSELWHACAG PLVSLPTAGT RVVYFPQGHS EQVAATTNRE  60
VDGHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLTPQEQKDT FLPMELGIPS  120
KQPSNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHDVEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL  240
SSDSMHIGLL AAAAHAAATN SCFTVFYNPR ASPSEFVIPL SKYIKAVYHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSLFP LRLKRPWHPG TSSFHDGRDE ATNGLMWLRG GPGDQALSSL NFQGAGLLPW  420
MQQRLDPTLL GNDHNQQYQA MLAAGMQNIG SVDLMRQQMM NFQQPFNYLQ QSGNTNPPLQ  480
LQQQQTIQQS VSPNILQPQA QVLAENLSHH ILQKSHNNRE DQTPPPQQQH TYQDTLLIQS  540
DQLHQRQQHS SLPSPSYSKP DFLDSNIKFS ASVSPGQNML SSLCPEGSGN LLNLSRSGQS  600
MLTEQLPQQS WAAPKFTPLQ VNAFGNSVPH VQYSGKDTAM VPPHCNSDTQ NPILFGVNID  660
SSGLLLPTTV PRYTTTSTDT DASTMALGES GFQAPLYPCM QDSSELLQSA GQVDPQNQTR  720
TFVKVYKSGS VGRSLDISRF SSYHELREEL AQMFGIEGKL EDPLRSGWQL VFVDRENDVL  780
LLGDDPWESF VNNVWYIKIL SPEDIQKMGE QAVESLGPSS GQRLNSTGAE SHEIVSGLPS  840
IGSLEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein