PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027369126.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 849aa    MW: 94519.4 Da    PI: 6.4795
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027369126.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.62.3e-23130231199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_027369126.1 130 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 220
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_027369126.1 221 KNQLLLGIRRA 231
                     9999****997 PP
2Auxin_resp120.81e-39256339183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+v+YnPras+seFv++++k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_027369126.1 256 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 339
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 849 aa     Download sequence    
MKLSTSGLGQ QGHEGIRGEK KCLNSELWHA CAGPLVSLPT AGTRVVYFPQ GHSEQVAATT  60
NREVDGHIPN YPSLPPQLIC QLHNVTMHAD VETDEVYAQM TLQPLTPQEQ KDTFLPMELG  120
IPSKQPSNYF CKTLTASDTS THGGFSVPRR AAEKVFPPLD FSQQPPAQEL IARDLHDVEW  180
KFRHIFRGQP KRHLLTTGWS VFVSAKRLVA GDSVLFIWNE KNQLLLGIRR ANRPQTVMPS  240
SVLSSDSMHI GLLAAAAHAA ATNSCFTVFY NPRASPSEFV IPLSKYIKAV YHTRVSVGMR  300
FRMLFETEES SVRRYMGTIT GISDLDPVRW PNSHWRSVKV GWDESTAGER QPRVSLWEIE  360
PLTTFPMYPS LFPLRLKRPW HPGTSSFHDG RDEATNGLMW LRGGPGDQAL SSLNFQGAGL  420
LPWMQQRLDP TLLGNDHNQQ YQAMLAAGMQ NIGSVDLMRQ QMMNFQQPFN YLQQSGNTNP  480
PLQLQQQQTI QQSVSPNILQ PQAQVLAENL SHHILQKSHN NREDQTPPPQ QQHTYQDTLL  540
IQSDQLHQRQ QHSSLPSPSY SKPDFLDSNI KFSASVSPGQ NMLSSLCPEG SGNLLNLSRS  600
GQSMLTEQLP QQSWAAPKFT PLQVNAFGNS VPHVQYSGKD TAMVPPHCNS DTQNPILFGV  660
NIDSSGLLLP TTVPRYTTTS TDTDASTMAL GESGFQAPLY PCMQDSSELL QSAGQVDPQN  720
QTRTFVKVYK SGSVGRSLDI SRFSSYHELR EELAQMFGIE GKLEDPLRSG WQLVFVDREN  780
DVLLLGDDPW ESFVNNVWYI KILSPEDIQK MGEQAVESLG PSSGQRLNST GAESHEIVSG  840
LPSIGSLEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein