PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027369088.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 555aa MW: 61404.3 Da PI: 7.1776

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027369088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	52.4	9.7e-17	357	403	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L++l+P++ K +Ka++Le+A+eY+ksLq XP_027369088.1 357 VHNLSERRRRDRINEKMRALQQLIPNS-----NKTDKASMLEEAIEYLKSLQ 403 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MNSNVPGWDF ESDTCLTNQK KLIGLDQEFV ELLWQNGQVV MHSQTHRKPV GNSSNLRQVQ 60 KSDQSTLTSG TCGNSSNLTQ DETYPWIHYP LEDPLEQQFY SNLSSELPSC EVETFKPIGQ 120 LEGAKFDKFV ASSAPHATSS SRPPNMKPSY VQGFRGNPIP DPRFHVPDSS QKINDFGGSR 180 KVLNFSHFSA PRYVSSSCGG AQFRENVTSN VSQSEAREYS VMTIGSSHCG SNHIPQDQDV 240 SRISSNGIWA TTTTTATTIS HEPEAVRDCI QRTVPRSDQG KSEKIEPTVT SSSGGSGGTS 300 IERTCSLSST RNQGQKRKDP DVEAQEEQSE ATELKSGDRN KASQRIGSSI RNRAAEVHNL 360 SERRRRDRIN EKMRALQQLI PNSNKTDKAS MLEEAIEYLK SLQLQLQVMW MGAGMSPVMF 420 PGIQHYMSQM NMGMAAPSLP SIHNPMQLPK VPNDQSMSMT QIPNQTLMCQ NPVLGAFSYQ 480 NLMQNPYLSE QYARYMGYHL MQSASQPMNV FRYGSQAVQH SQTIIAPSNN NNGPMNGTAN 540 IDDAVSGKTG SCTFN

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MNSNVPGWDF ESDTCLTNQK KLIGLDQEFV ELLWQNGQVV MHSQTHRKPV GNSSNLRQVQ  60
KSDQSTLTSG TCGNSSNLTQ DETYPWIHYP LEDPLEQQFY SNLSSELPSC EVETFKPIGQ  120
LEGAKFDKFV ASSAPHATSS SRPPNMKPSY VQGFRGNPIP DPRFHVPDSS QKINDFGGSR  180
KVLNFSHFSA PRYVSSSCGG AQFRENVTSN VSQSEAREYS VMTIGSSHCG SNHIPQDQDV  240
SRISSNGIWA TTTTTATTIS HEPEAVRDCI QRTVPRSDQG KSEKIEPTVT SSSGGSGGTS  300
IERTCSLSST RNQGQKRKDP DVEAQEEQSE ATELKSGDRN KASQRIGSSI RNRAAEVHNL  360
SERRRRDRIN EKMRALQQLI PNSNKTDKAS MLEEAIEYLK SLQLQLQVMW MGAGMSPVMF  420
PGIQHYMSQM NMGMAAPSLP SIHNPMQLPK VPNDQSMSMT QIPNQTLMCQ NPVLGAFSYQ  480
NLMQNPYLSE QYARYMGYHL MQSASQPMNV FRYGSQAVQH SQTIIAPSNN NNGPMNGTAN  540
IDDAVSGKTG SCTFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	362	367	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43010.2	2e-57	bHLH family protein