PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368853.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 482aa MW: 55982.1 Da PI: 6.5736

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368853.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.3	4e-19	228	274	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ed ll+++v+q+G + W+ Ia+t++ gR +kqc++rw+++l XP_027368853.1 228 KGQWTADEDRLLIQLVEQYGVRKWSHIAQTLP-GRIGKQCRERWHNHL 274 799***************************.***********97 PP
2	Myb_DNA-binding	58.1	2.1e-18	282	322	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+eEd++l++a+++ G++ W+ Ia++++ gRt++++k++w+ XP_027368853.1 282 IWTEEEDKILIQAHAEIGNK-WAEIAKRLP-GRTENSIKNHWN 322 6*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MLHINCPVIN AFALPPIKER KWRWLETQMF PLGSVTPSLM DIETNLNENY ASQPMHLQEN 60 YLRSRMKDDI PFGDPSSQCF LQDFPRIDQF NVNDYSSNPV FGIQTSNFDP FDHNVTCESA 120 PADFEVYECK PFPESNCNGH AHLTDNFQYE GYSLNLPRRN QLDMMVGNQS YVPFNPLETK 180 PLNIVVPDEV SYISPPNYYK RVGLNKTNRE TPTTRRTFKV RKKSNIVKGQ WTADEDRLLI 240 QLVEQYGVRK WSHIAQTLPG RIGKQCRERW HNHLRPDIKK DIWTEEEDKI LIQAHAEIGN 300 KWAEIAKRLP GRTENSIKNH WNATKRRQYS KRKCRSKYPR GSLLQEYIKS LNLDQNPPID 360 YRKKSVVKAN ANAKTNNTST RKATSQPHTA DQFCPNNRLV PNYEFNEVPD ICLDDNLFEE 420 GCSIDSLLDD MQSASTVDEK DFDGKMLFNV DDHHETDMPQ EMMAPNVGIE VKKELDLVEM 480 MT

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MLHINCPVIN AFALPPIKER KWRWLETQMF PLGSVTPSLM DIETNLNENY ASQPMHLQEN  60
YLRSRMKDDI PFGDPSSQCF LQDFPRIDQF NVNDYSSNPV FGIQTSNFDP FDHNVTCESA  120
PADFEVYECK PFPESNCNGH AHLTDNFQYE GYSLNLPRRN QLDMMVGNQS YVPFNPLETK  180
PLNIVVPDEV SYISPPNYYK RVGLNKTNRE TPTTRRTFKV RKKSNIVKGQ WTADEDRLLI  240
QLVEQYGVRK WSHIAQTLPG RIGKQCRERW HNHLRPDIKK DIWTEEEDKI LIQAHAEIGN  300
KWAEIAKRLP GRTENSIKNH WNATKRRQYS KRKCRSKYPR GSLLQEYIKS LNLDQNPPID  360
YRKKSVVKAN ANAKTNNTST RKATSQPHTA DQFCPNNRLV PNYEFNEVPD ICLDDNLFEE  420
GCSIDSLLDD MQSASTVDEK DFDGKMLFNV DDHHETDMPQ EMMAPNVGIE VKKELDLVEM  480
MT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	2e-93	MYB family protein