PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368745.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GRF

Protein Properties

Length: 371aa MW: 42217.6 Da PI: 8.1193

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368745.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.8	1e-24	76	119	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_027368745.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 119 79***************************************987 PP
2	QLQ	56.8	6.8e-20	8	42	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT++Q+q+L++Q+l+yKy+a++ +Pp+Ll+ i+ XP_027368745.1 8 PFTPSQWQELEHQALIYKYMASGISIPPDLLFTIK 42 8******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MNARNRFPFT PSQWQELEHQ ALIYKYMASG ISIPPDLLFT IKRSYIDSPL SSRLMSHQPQ 60 HFGWNYLPMG LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVEV 120 LKTTPTATNT DASTPTILSI TKHSPALTPT THSLSVSSHD TFHHHHPHSF LYHTPPSRPS 180 SASAFSFQDN SAPLFLENGS SSHNNNTHCR NRYVYGLKEE VDEHAFFTEP SGTMRSFSAS 240 SMEDSWQLTP LTISSSSSSK QRSCSGLSND NNTEYSYLQL QSRNDNNSKQ PQQDHGCYIS 300 GSDIKCETFM KLGKEEEEEP QKTVHRFFDE WPPPKSRGSW LDLDDKSSTT QLSISIPTSS 360 HDFTTFSSRD G

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MNARNRFPFT PSQWQELEHQ ALIYKYMASG ISIPPDLLFT IKRSYIDSPL SSRLMSHQPQ  60
HFGWNYLPMG LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVEV  120
LKTTPTATNT DASTPTILSI TKHSPALTPT THSLSVSSHD TFHHHHPHSF LYHTPPSRPS  180
SASAFSFQDN SAPLFLENGS SSHNNNTHCR NRYVYGLKEE VDEHAFFTEP SGTMRSFSAS  240
SMEDSWQLTP LTISSSSSSK QRSCSGLSND NNTEYSYLQL QSRNDNNSKQ PQQDHGCYIS  300
GSDIKCETFM KLGKEEEEEP QKTVHRFFDE WPPPKSRGSW LDLDDKSSTT QLSISIPTSS  360
HDFTTFSSRD G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-53	GRF family protein