PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368553.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 342aa MW: 38733.1 Da PI: 5.2607

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368553.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.5	6.2e-18	20	67	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ede+l+ +v+q+G g+W+ + r+ g+ R++k+c++rw ++l XP_027368553.1 20 KGPWTAQEDEILAAYVTQHGVGNWNEVQRRTGLARCGKSCRLRWSNHL 67 79*******************************************996 PP
2	Myb_DNA-binding	48.7	1.8e-15	73	116	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+ ++v++++ +G++ W++ a++++ gRt++++k++w++ XP_027368553.1 73 KGSFSPEEQRKIVELHATMGNK-WAKMAQELP-GRTDNEIKNFWNT 116 799*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MSSSSSKGED ASIENEILKK GPWTAQEDEI LAAYVTQHGV GNWNEVQRRT GLARCGKSCR 60 LRWSNHLRPD LRKGSFSPEE QRKIVELHAT MGNKWAKMAQ ELPGRTDNEI KNFWNTRLKK 120 RRRAGLPLYP DDIKPATLNT ANQGSRLKDS TQQNNDSQID TSISVPELIF DSYSLSQNQL 180 QIPPIFVEQG SYNPIMHPPE QLHQDSHELY NCLDSTCVIT AVAPPRRLID NLRTSYRSQS 240 GVDYTSEGNA CLSPSLPIFE MPPFPSTLDF LVEEHNPQLE SMSYPPTNLE GNSHHCSTDP 300 SEAQKEPNPG NEDALPQINW LEDYQKIEDT LFSIVQPYVN RN

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MSSSSSKGED ASIENEILKK GPWTAQEDEI LAAYVTQHGV GNWNEVQRRT GLARCGKSCR  60
LRWSNHLRPD LRKGSFSPEE QRKIVELHAT MGNKWAKMAQ ELPGRTDNEI KNFWNTRLKK  120
RRRAGLPLYP DDIKPATLNT ANQGSRLKDS TQQNNDSQID TSISVPELIF DSYSLSQNQL  180
QIPPIFVEQG SYNPIMHPPE QLHQDSHELY NCLDSTCVIT AVAPPRRLID NLRTSYRSQS  240
GVDYTSEGNA CLSPSLPIFE MPPFPSTLDF LVEEHNPQLE SMSYPPTNLE GNSHHCSTDP  300
SEAQKEPNPG NEDALPQINW LEDYQKIEDT LFSIVQPYVN RN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26960.1	1e-63	MYB family protein