PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027368497.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family LBD
Protein Properties Length: 218aa    MW: 24347.3 Da    PI: 6.1554
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027368497.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.41.2e-387105198
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC++dCv+apyf  ++ p +fa+vhk++Gasnv+kll++lp ++r+da+ ++ yeA ar++dP+yG+v++i +lqqq+++l++e+
  XP_027368497.1   7 SCGACKFLRRKCTRDCVFAPYFSYDEaPTHFAAVHKIYGASNVSKLLSHLPIHNRSDAAITISYEALARMQDPIYGCVAHIYALQQQVASLQEEI 101
                     6*********************998879******************************************************************9 PP

          DUF260  95 allk 98 
                     ++l+
  XP_027368497.1 102 DTLG 105
                     8875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MTGFSSSCGA CKFLRRKCTR DCVFAPYFSY DEAPTHFAAV HKIYGASNVS KLLSHLPIHN  60
RSDAAITISY EALARMQDPI YGCVAHIYAL QQQVASLQEE IDTLGSLMAN SKVSVVNCGS  120
VQPPMNSNNG IHSILQHDDT RTQYYQNQMA NFLSQEGSAT VYQSLDKQMD IELPNVHGFE  180
ESSFGDCNPN PLEQFLSGID QEVFMNHPWF KHNANIKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.13e-58LBD family protein