PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027368497.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | LBD | ||||||||
Protein Properties | Length: 218aa MW: 24347.3 Da PI: 6.1554 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 123.4 | 1.2e-38 | 7 | 105 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC++dCv+apyf ++ p +fa+vhk++Gasnv+kll++lp ++r+da+ ++ yeA ar++dP+yG+v++i +lqqq+++l++e+ XP_027368497.1 7 SCGACKFLRRKCTRDCVFAPYFSYDEaPTHFAAVHKIYGASNVSKLLSHLPIHNRSDAAITISYEALARMQDPIYGCVAHIYALQQQVASLQEEI 101 6*********************998879******************************************************************9 PP DUF260 95 allk 98 ++l+ XP_027368497.1 102 DTLG 105 8875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MTGFSSSCGA CKFLRRKCTR DCVFAPYFSY DEAPTHFAAV HKIYGASNVS KLLSHLPIHN 60 RSDAAITISY EALARMQDPI YGCVAHIYAL QQQVASLQEE IDTLGSLMAN SKVSVVNCGS 120 VQPPMNSNNG IHSILQHDDT RTQYYQNQMA NFLSQEGSAT VYQSLDKQMD IELPNVHGFE 180 ESSFGDCNPN PLEQFLSGID QEVFMNHPWF KHNANIKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06080.1 | 3e-58 | LBD family protein |