PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368435.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 417aa MW: 48038.5 Da PI: 6.5743

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368435.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53	7.7e-17	133	180	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+++vkq+G W+ Ia+++ gR +kqc++rw+++l XP_027368435.1 133 KGQWTEEEDRKLIRLVKQYGDQrKWTEIAEKLE-GRIGKQCRERWHNHL 180 799***************99*******.***********97 PP
2	Myb_DNA-binding	51.7	2e-16	186	228	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++W++eE+ +lvd +++ G++ W+ Ia++++ gRt++ +k++w+ XP_027368435.1 186 KDSWSEEEERILVDTHARVGNR-WAEIAKKIP-GRTENAIKNHWN 228 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MVREENNANY NLSVTYRSSP PLTAIERFLR GQHSHFPHQQ QQPQNVARNN DASVFTEELC 60 SFSSSDGSNS SFLWPNSTQE CFVDGLTANE EALMWNNINQ SPTLCLKDMR LLGKKARVVG 120 KRSKKESSVF WIKGQWTEEE DRKLIRLVKQ YGDQRKWTEI AEKLEGRIGK QCRERWHNHL 180 RPDIKKDSWS EEEERILVDT HARVGNRWAE IAKKIPGRTE NAIKNHWNAT KRRQNSKRKN 240 RKMHSSNTKP NSSILEDYIR SQTLIGTTCI NPTQGIITDT TILEDPDAKS LNLVFSEPSE 300 SLANELPFMQ QIFTENQNQQ SLGNVELEDS MFSMVSPTCD LDFCQGKVND DANNLQHLEA 360 HPTPLNYHPS DLYIYHLFNV ATGYGNQSLN IDFHQENQYC SEGKREMDLI EIISSSS

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MVREENNANY NLSVTYRSSP PLTAIERFLR GQHSHFPHQQ QQPQNVARNN DASVFTEELC  60
SFSSSDGSNS SFLWPNSTQE CFVDGLTANE EALMWNNINQ SPTLCLKDMR LLGKKARVVG  120
KRSKKESSVF WIKGQWTEEE DRKLIRLVKQ YGDQRKWTEI AEKLEGRIGK QCRERWHNHL  180
RPDIKKDSWS EEEERILVDT HARVGNRWAE IAKKIPGRTE NAIKNHWNAT KRRQNSKRKN  240
RKMHSSNTKP NSSILEDYIR SQTLIGTTCI NPTQGIITDT TILEDPDAKS LNLVFSEPSE  300
SLANELPFMQ QIFTENQNQQ SLGNVELEDS MFSMVSPTCD LDFCQGKVND DANNLQHLEA  360
HPTPLNYHPS DLYIYHLFNV ATGYGNQSLN IDFHQENQYC SEGKREMDLI EIISSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58850.1	1e-63	MYB family protein