PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027368377.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 331aa    MW: 37968.7 Da    PI: 5.3985
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027368377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.62.8e-27959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+ien +nrqvtfskRrng++KKA+ELSvLCd+e+a+i+fs++ +l  +ss
  XP_027368377.1  9 KKIENVTNRQVTFSKRRNGLIKKAYELSVLCDIEIALIMFSPSERLNHFSS 59
                    68**********************************************996 PP
2K-box24.51.1e-091261901478
           K-box  14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqie 78 
                      e+lqqe+++L++++++ + ++R +  + L+  s+ eL+  e++L + l+++ ++K+ ll ++++
  XP_027368377.1 126 IEELQQEVNRLQQQLQMAEDQIRIYEPDPLKMTSMAELETSEKHLVDTLTRVIQRKEYLLSNHLS 190
                     689*********************************************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MGRVKLEIKK IENVTNRQVT FSKRRNGLIK KAYELSVLCD IEIALIMFSP SERLNHFSSR  60
RRIEDVFIRY INLPDQERDN AVSFPELPYR RGIQNKEYLL RTLQQLRSEN DIALRLANSG  120
DINFDIEELQ QEVNRLQQQL QMAEDQIRIY EPDPLKMTSM AELETSEKHL VDTLTRVIQR  180
KEYLLSNHLS SYDPSGMQGI PTSFENVSWL QDGSQNHPQI FDASAPLDPL RDLSSTVYGS  240
FSQGTSSNVD PRGMGECHVT NPSDANLQAW PQGYTLYPSI QHDMVGPDMP DMMPHGQVNI  300
PITASHVEPP KNEPAEYDQC KQPHHHQLNA Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.11e-101MIKC_MADS family protein