PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368327.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 349aa MW: 38614.8 Da PI: 6.0471

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.5	1.3e-17	42	89	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde l++++k+ G g+W+t +++ g++R++k+c++rw +yl XP_027368327.1 42 RGPWTPEEDEVLANYIKKEGEGRWRTLPKRAGLHRCGKSCRLRWMNYL 89 89********************************************97 PP
2	Myb_DNA-binding	46.6	8e-15	100	140	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_027368327.1 100 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 140 89*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MRNPTATATE TNKNKKSNDS GGSNSNNNGT VTPCCSKVGL KRGPWTPEED EVLANYIKKE 60 GEGRWRTLPK RAGLHRCGKS CRLRWMNYLR PSVKRGHIAP DEEDLILRLH RLLGNRWSLI 120 AGRIPGRTDN EIKNYWNTHL SKKLISQGID PRTHKPLNPP SVPSSSISTV PSSKSVPIII 180 GNHQNPSTRQ DLIINVNQEI DLLGQYQQLQ GAGNIVNNDN AYGDDNINPA TTGTDDVSAM 240 GFINNEECED DINVNYCSDD VFSSFLNSLI NEDAFASQQH HMQSEPPNGH GIPLPNSDDR 300 IQDPLISITT SSATQAYDDG LGVLWESPLM PATFSQNDPN TKRVLDQPE

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MRNPTATATE TNKNKKSNDS GGSNSNNNGT VTPCCSKVGL KRGPWTPEED EVLANYIKKE  60
GEGRWRTLPK RAGLHRCGKS CRLRWMNYLR PSVKRGHIAP DEEDLILRLH RLLGNRWSLI  120
AGRIPGRTDN EIKNYWNTHL SKKLISQGID PRTHKPLNPP SVPSSSISTV PSSKSVPIII  180
GNHQNPSTRQ DLIINVNQEI DLLGQYQQLQ GAGNIVNNDN AYGDDNINPA TTGTDDVSAM  240
GFINNEECED DINVNYCSDD VFSSFLNSLI NEDAFASQQH HMQSEPPNGH GIPLPNSDDR  300
IQDPLISITT SSATQAYDDG LGVLWESPLM PATFSQNDPN TKRVLDQPE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	1e-81	MYB family protein