PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368177.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 419aa MW: 45622.1 Da PI: 10.0423

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368177.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.5	1.1e-05	54	76	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_027368177.1 54 FVCEICNKGFQRDQNLQLHRRGH 76 89*******************88 PP
2	zf-C2H2	12.7	0.0004	131	152	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ C k + +s+ k H++t+ XP_027368177.1 131 SCQRCAKKYAVQSDWKAHMKTC 152 8*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MTIPISKFAF WVYRNYLLII LNPTQKKRNL PGRPDPDAEV IALSPKTLLA TNRFVCEICN 60 KGFQRDQNLQ LHRRGHNLPW KLRQGKGKEA RKKVYVCPEP SCVHNKPCRA LGDLTGIKKH 120 FCRKHGEKKW SCQRCAKKYA VQSDWKAHMK TCGIREYRCH CGNFFSRRDK FIMHKAFCDA 180 LANEGALPTI GGGDESEERN SNSKRNVPLA SSPPLTPSMS LVSAAMSVQS SGILENPMNK 240 GATGTSSTST SIRVFASIFA SSTLCCSKSS SITFSNHMTA SSTATPIPTC LSLSKSESSH 300 YTSSSQAPAL SATALLQKAA QMGAAASNAS LRLQSLGLAT TSSSSPEDET ISAMLHWNIK 360 HAKQHAKQDN NHSVPNLMVD SQTQPLTRDL LGLSVGGNAS LSALFPSFGE SFDASAKHC

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MTIPISKFAF WVYRNYLLII LNPTQKKRNL PGRPDPDAEV IALSPKTLLA TNRFVCEICN  60
KGFQRDQNLQ LHRRGHNLPW KLRQGKGKEA RKKVYVCPEP SCVHNKPCRA LGDLTGIKKH  120
FCRKHGEKKW SCQRCAKKYA VQSDWKAHMK TCGIREYRCH CGNFFSRRDK FIMHKAFCDA  180
LANEGALPTI GGGDESEERN SNSKRNVPLA SSPPLTPSMS LVSAAMSVQS SGILENPMNK  240
GATGTSSTST SIRVFASIFA SSTLCCSKSS SITFSNHMTA SSTATPIPTC LSLSKSESSH  300
YTSSSQAPAL SATALLQKAA QMGAAASNAS LRLQSLGLAT TSSSSPEDET ISAMLHWNIK  360
HAKQHAKQDN NHSVPNLMVD SQTQPLTRDL LGLSVGGNAS LSALFPSFGE SFDASAKHC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-101	C2H2 family protein