PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027368039.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 989aa MW: 111785 Da PI: 5.1884

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027368039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.1	9.9e-14	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l XP_027368039.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	32.8	1.6e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l XP_027368039.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 989 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDTACVKD ENYDPGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TKGKKAKRKA REKQLEEARR 180 LASLQKKREL KAAGIDIRQR KRKRRGIDYN GEIPFEKRPP PGFFDVTDED RPVEQPKFPT 240 TIEELEGKRR VDVETQLRKQ DIAKNKIAQR QDAPSAILHA NKLNDPETVR KRSKLMLPPP 300 QISDQELEEI AKLDYASDLA GNEEPVEGGG ATRALLANYA QTPGQGMTPL RTPKRTPAGK 360 GDAVMMEAEN LARLRESQTP LLGGENPELY PSDFSGVTPK KKEIQTPNPM LTPSATPGGE 420 GLTPKIGMTP ARDGLTFSMT PKGTPLRDEL HINEEMNMHE STKLELQRQA DVRRSLRSGL 480 GRLPQPKNEY QIMMQPVPED AEEPEQKIEE DMSDRIAREK AEEEARQQAL LRKRSKVLQR 540 ELPRPPAASL ELIRNSLMRA DGDKSSFVPP TSIEQADEMI RRELLTLLEH DNAKYPLGEK 600 VHKEKKKGAK RTVNKPAVPV IEDFQEDEIK DADKLIKEEA QFLCVAMGHE SEPLDEFIEA 660 HRTCLNDLMY FPTRNAYGLS SVAGNMEKLA ALQNEFENVR NKLDDGKYKS VDSVRLEKKV 720 MVLTQGYEVL KKSLWPQIEA TFKQMDIAAT ELECFEALQK QEQVAASHRI NNLWAEIQKQ 780 KELEKTLQIG YGSLIEELEK IQNIMDQYRL QAPKQEKIEA NNHVCESTET AASEMDNIQG 840 TEICKVVPHT VEHGHALEVD PSHDGTADQE VDIVQDQATC SPKNDMVVDS DKMQMTHGFD 900 VKLPDATPIA EDVNKKVEVE GAGTDANNGE TMLEMGAAVE TGSYERNKDQ DVVVEAVNSQ 960 GNSMQETTAF DEKDKMQVAD GRGEEANRL

Sequence ? help Back to Top

Protein Sequence Length: 989 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDTACVKD ENYDPGDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TKGKKAKRKA REKQLEEARR  180
LASLQKKREL KAAGIDIRQR KRKRRGIDYN GEIPFEKRPP PGFFDVTDED RPVEQPKFPT  240
TIEELEGKRR VDVETQLRKQ DIAKNKIAQR QDAPSAILHA NKLNDPETVR KRSKLMLPPP  300
QISDQELEEI AKLDYASDLA GNEEPVEGGG ATRALLANYA QTPGQGMTPL RTPKRTPAGK  360
GDAVMMEAEN LARLRESQTP LLGGENPELY PSDFSGVTPK KKEIQTPNPM LTPSATPGGE  420
GLTPKIGMTP ARDGLTFSMT PKGTPLRDEL HINEEMNMHE STKLELQRQA DVRRSLRSGL  480
GRLPQPKNEY QIMMQPVPED AEEPEQKIEE DMSDRIAREK AEEEARQQAL LRKRSKVLQR  540
ELPRPPAASL ELIRNSLMRA DGDKSSFVPP TSIEQADEMI RRELLTLLEH DNAKYPLGEK  600
VHKEKKKGAK RTVNKPAVPV IEDFQEDEIK DADKLIKEEA QFLCVAMGHE SEPLDEFIEA  660
HRTCLNDLMY FPTRNAYGLS SVAGNMEKLA ALQNEFENVR NKLDDGKYKS VDSVRLEKKV  720
MVLTQGYEVL KKSLWPQIEA TFKQMDIAAT ELECFEALQK QEQVAASHRI NNLWAEIQKQ  780
KELEKTLQIG YGSLIEELEK IQNIMDQYRL QAPKQEKIEA NNHVCESTET AASEMDNIQG  840
TEICKVVPHT VEHGHALEVD PSHDGTADQE VDIVQDQATC SPKNDMVVDS DKMQMTHGFD  900
VKLPDATPIA EDVNKKVEVE GAGTDANNGE TMLEMGAAVE TGSYERNKDQ DVVVEAVNSQ  960
GNSMQETTAF DEKDKMQVAD GRGEEANRL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	205	KKRELKAAGIDIRQRKRKRR
2	199	205	QRKRKRR
3	200	205	RKRKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein