PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027368038.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 990aa MW: 111959 Da PI: 5.2272 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.1 | 9.9e-14 | 8 | 53 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l XP_027368038.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 32.8 | 1.6e-10 | 60 | 103 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l XP_027368038.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68*****************99.********8..**********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 990 aa Download sequence |
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDTACVKD ENYDPGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TKGKKAKRKA REKQLEEARR 180 LASLQKKREL KAAGIDIRQR KRKRRGIDYN GEIPFEKRPP PGFFDVTDED RPVEQPKFPT 240 TIEELEGKRR VDVETQLRKQ DIAKNKIAQR QDAPSAILHA NKLNDPETVR KRSKLMLPPP 300 QISDQELEEI AKLDYASDLA GNEEPVEGGG ATRALLANYA QTPGQGMTPL RTPKRTPAGK 360 GDAVMMEAEN LARLRESQTP LLGGENPELY PSDFSGVTPK KKEIQTPNPM LTPSATPGGE 420 GLTPKIGMTP ARDGLTFSMT PKGTPLRDEL HINEEMNMHE STKLELQRQA DVRRSLRSGL 480 GRLPQPKNEY QIMMQPVPED AEEPEQKIEE DMSDRIAREK AEEEARQQAL LRKRSKVLQR 540 ELPRPPAASL ELIRNSLMRA DGDKSSFVPP TSIEQADEMI RRELLTLLEH DNAKYPLGEK 600 VHKEKKKGAK RTVNKPAVPV IEDFQEDEIK DADKLIKEEA QFLCVAMGHE SEPLDEFIEA 660 HRTCLNDLMY FPTRNAYGLS SVAGNMEKLA ALQNEFENVR NKLDDGKYKS VDSVRLEKKV 720 MVLTQGYEMR VKKSLWPQIE ATFKQMDIAA TELECFEALQ KQEQVAASHR INNLWAEIQK 780 QKELEKTLQI GYGSLIEELE KIQNIMDQYR LQAPKQEKIE ANNHVCESTE TAASEMDNIQ 840 GTEICKVVPH TVEHGHALEV DPSHDGTADQ EVDIVQDQAT CSPKNDMVVD SDKMQMTHGF 900 DVKLPDATPI AEDVNKKVEV EGAGTDANNG ETMLEMGAAV ETGSYERNKD QDVVVEAVNS 960 QGNSMQETTA FDEKDKMQVA DGRGEEANRL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 186 | 205 | KKRELKAAGIDIRQRKRKRR |
2 | 199 | 205 | QRKRKRR |
3 | 200 | 205 | RKRKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09770.1 | 0.0 | MYB family protein |