PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027367944.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB_related
Protein Properties Length: 299aa    MW: 33421 Da    PI: 8.8671
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027367944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.72.3e-125296147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_027367944.1 52 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 96
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MVSKNPNPSE AFYLDPSGMQ LPGLLPFAAT ATDSLEDPSK KTRKPYTITK SRESWTEPEH  60
DKFLEALQLF DRDWKKIEAF VGSKTVIQIR SHAQKYFLKV QKSGTSEHLP PPRPKRKAAH  120
PYPQKASKNA PVLSQVSGSF QSSSALLEPG CIIKHDSSAM LKTPIINTAV SSWSNNTLQK  180
TANVLHGQKV NHCCSSREST PRARLGESNV LPDFALVYSF IGSVFDPNVS GHLHKLKRMD  240
PIDVETVLLL MRNLSINLAS PDFEDHRRLL ASYEVEPETD NCIINVDQFM HNEQLKSAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.15e-98MYB_related family protein