PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027367614.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | LBD | ||||||||
Protein Properties | Length: 177aa MW: 19372.3 Da PI: 8.4123 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 94.8 | 9.5e-30 | 2 | 102 | 1 | 96 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+vlr++C++dC+l+ ++ p++q++++ +v+k+FG++ ++++l+++p ++r+++++sl+yeA r+ +Pv+Gavg++++++++l+q+ XP_027367614.1 2 SCNGCRVLRKGCSDDCMLRHCLlwienPQAQAHATVFVAKFFGRAALMSFLSSVPANQRSALFQSLLYEAVGRTINPVNGAVGLLWTGNWHLCQM 96 6*********************************************************************************************9 PP DUF260 91 kaelal 96 +e +l XP_027367614.1 97 GVEKVL 102 887665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MSCNGCRVLR KGCSDDCMLR HCLLWIENPQ AQAHATVFVA KFFGRAALMS FLSSVPANQR 60 SALFQSLLYE AVGRTINPVN GAVGLLWTGN WHLCQMGVEK VLRGGAALTP LPQFSGVDVD 120 AQQVTASERV VVGGGRCPQP KKQRARTPSE ESEMSTLESR TEDCAPQSER KLLTLFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49940.1 | 5e-61 | LBD family protein |