PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027367611.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 525aa MW: 55885.6 Da PI: 8.0257

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027367611.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	54.5	3e-17	120	217	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...........rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +W++ + +L+ea++e+ ++l+rg+l++ +Weev+k++ +++ +s +qCk+k++nl+kryk + ++ +++ + ++s + +f+ XP_027367611.1 120 EWSDTAIACLLEAYTEKFNQLNRGNLRGRDWEEVAKAVgercgggggegNHHKSYKSVEQCKNKIDNLKKRYKVELQRIGSGgSGIATSLWHWFK 214 5*********************************************9999999****************9999888885777888999999 PP trihelix 84 qle 86 ++e XP_027367611.1 215 KVE 217 875 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MATEDYSLLD SPSHAQPHIH APTRHHFASS SSSSPSTLPA AESAAADYYP HTSFSDAAED 60 SSGPSKSGSA VHTPNSKRVS AAGSPYFYNK KLKSSANPDP ATDAAFRGGG GGDYRKDREE 120 WSDTAIACLL EAYTEKFNQL NRGNLRGRDW EEVAKAVGER CGGGGGEGNH HKSYKSVEQC 180 KNKIDNLKKR YKVELQRIGS GGSGIATSLW HWFKKVEIIV GNCVTVKNVS DDDKEGGCGG 240 GAGSGSGGAS SSISRQTKIR YAPSISAMAN NLKTKPASNL KWRRVLFKIS GSALAGNCQN 300 IDPEVAMQIA REVATACCLG VEVAIVVGGR NFFCGDAWVS ATGLDRPTAY QVGMMATVMN 360 SILLQSALEK LGVQARVQSA FSIPEVAEPY NRQRAIRHLE KGRVVIFGGV GAGTGNPLFT 420 TDTAAALRAS ELNADAVLKG TNVNGVFDCQ SRNDNVTLDH ISFREIVSRG ITSMDMTALA 480 YCEENGIPVV VFNMLEPVNV SRALCGDKVG TLIDQTGRVE HQLPS

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MATEDYSLLD SPSHAQPHIH APTRHHFASS SSSSPSTLPA AESAAADYYP HTSFSDAAED  60
SSGPSKSGSA VHTPNSKRVS AAGSPYFYNK KLKSSANPDP ATDAAFRGGG GGDYRKDREE  120
WSDTAIACLL EAYTEKFNQL NRGNLRGRDW EEVAKAVGER CGGGGGEGNH HKSYKSVEQC  180
KNKIDNLKKR YKVELQRIGS GGSGIATSLW HWFKKVEIIV GNCVTVKNVS DDDKEGGCGG  240
GAGSGSGGAS SSISRQTKIR YAPSISAMAN NLKTKPASNL KWRRVLFKIS GSALAGNCQN  300
IDPEVAMQIA REVATACCLG VEVAIVVGGR NFFCGDAWVS ATGLDRPTAY QVGMMATVMN  360
SILLQSALEK LGVQARVQSA FSIPEVAEPY NRQRAIRHLE KGRVVIFGGV GAGTGNPLFT  420
TDTAAALRAS ELNADAVLKG TNVNGVFDCQ SRNDNVTLDH ISFREIVSRG ITSMDMTALA  480
YCEENGIPVV VFNMLEPVNV SRALCGDKVG TLIDQTGRVE HQLPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	1e-173	Trihelix family protein