PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027367109.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 654aa MW: 72422.6 Da PI: 6.5715

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027367109.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48	3e-15	253	312	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ k+++lg ++ +e+Aa+a++ a++k++g XP_027367109.1 253 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgKQVYLGGYDKEEKAARAYDLAALKYWG 312 57*****************666664478446***********************98 PP
2	AP2	46.8	7.3e-15	355	406	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_027367109.1 355 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 406 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 654 aa Download sequence
MASMNWLDFS LSPQELPPQP PSNEDRSQTM TPHHAFNSHG ISASDVSAQC FDLTSHSTTH 60 HSLNLPPFGL FEDNTHHTPL DWNTKGLGSN TEDNYNSQNL LLGTSTSCSS DRNVDSNQQH 120 PKLENFLGQH SLGEHDFMFP NSSLKLPPQP SEKPATCGDG SPKNSSSIGL SMIKTWLRNQ 180 TTESDSVPAA NTSLSMSTTV SQSSTLALPL LTASVDGESS SSDSKQQQDN NQTVAIVENV 240 PRKSVDTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QTRKGKQVYL GGYDKEEKAA 300 RAYDLAALKY WGTTTTTNFP ISQYEKELEE MKHMTRQEYV ASLRRKSSGF SRGASIYRGV 360 TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGLKAV TNFDMSRYDV 420 RSILESSNLP IGGAAKRLKD VDQVDLTIIR AQTSNVDSNI NIYGATHHAW PASLAFLQSQ 480 PYTSHLNCTY GHKLWCKQEQ DSDVPQTFHD IHQLQLGNTH NFFQSNVMSI DSASVDNNSS 540 AASNSIVYGD GYAIPMATST FIQEDDVNQN NRSSGFGDND VKTFGYENVF TSISTTDPYH 600 ARNLCFLSHQ TSADKGSAYE ACNSWVPTTI PTLSPRTTNM ALVPGASSFT LLNE

Sequence ? help Back to Top

Protein Sequence Length: 654 aa Download sequence

MASMNWLDFS LSPQELPPQP PSNEDRSQTM TPHHAFNSHG ISASDVSAQC FDLTSHSTTH  60
HSLNLPPFGL FEDNTHHTPL DWNTKGLGSN TEDNYNSQNL LLGTSTSCSS DRNVDSNQQH  120
PKLENFLGQH SLGEHDFMFP NSSLKLPPQP SEKPATCGDG SPKNSSSIGL SMIKTWLRNQ  180
TTESDSVPAA NTSLSMSTTV SQSSTLALPL LTASVDGESS SSDSKQQQDN NQTVAIVENV  240
PRKSVDTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QTRKGKQVYL GGYDKEEKAA  300
RAYDLAALKY WGTTTTTNFP ISQYEKELEE MKHMTRQEYV ASLRRKSSGF SRGASIYRGV  360
TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGLKAV TNFDMSRYDV  420
RSILESSNLP IGGAAKRLKD VDQVDLTIIR AQTSNVDSNI NIYGATHHAW PASLAFLQSQ  480
PYTSHLNCTY GHKLWCKQEQ DSDVPQTFHD IHQLQLGNTH NFFQSNVMSI DSASVDNNSS  540
AASNSIVYGD GYAIPMATST FIQEDDVNQN NRSSGFGDND VKTFGYENVF TSISTTDPYH  600
ARNLCFLSHQ TSADKGSAYE ACNSWVPTTI PTLSPRTTNM ALVPGASSFT LLNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-132	AP2 family protein