PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027367051.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 220aa MW: 23861.4 Da PI: 6.9698

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027367051.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	136.5	9.9e-43	67	166	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+a+la XP_027367051.1 67 PCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLA 161 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_027367051.1 162 KAQAE 166 *9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MEYKVKTTTS SPPIPIHVPT MLSNSPPSSS SSPPSHSPTP FPSPSQGSPS AAPPSPPPPP 60 PPVVVSPCAA CKILRRRCVE KCVLAPYFPP TDPLKFTIAH RVFGASNIIK FLQELPESQR 120 ADAVSSMVYE ANARIRDPVY GCAGAICQLQ KQVSELQAQL AKAQAELVNM QCQQANLVAL 180 ICMEMSQSQD QHMPQPQPHV DMSCFLEDNS FGSAWEPLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	4e-63	LBD family protein