PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027367040.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 423aa MW: 46977.8 Da PI: 6.4081

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027367040.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	28.7	2.8e-09	16	59	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 +r C+ + k+++++C ++ +lC+ C ++ H+ H++v XP_027367040.1 16 ARACDSCITKRARWYCAADDAFLCQACDSSVHSAnplarrHERV 59 578*****************************667888888876 PP
2	CCT	68.1	2.4e-23	368	411	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+a XP_027367040.1 368 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 411 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MSSAKNVANA VGGKTARACD SCITKRARWY CAADDAFLCQ ACDSSVHSAN PLARRHERVR 60 LKTASFKSAE EQPNCAPSWH TKKARTPRHG KHSRNNNHHH FHLVPEVGSD EVNSHEENEE 120 QLLYRVPIFD PFVGELCSTS PPSSVAESES KGTKGSMTMS LSNVVLLGCE NHEMEGLHGL 180 LPSEVELAEF AADVESLLGR GLENECVGME ELGLVDAKEE CSVGSGKVKV EEEEGPAQVA 240 SRTCKVEADE VEMVGRDQSF EFSFDYDSLE TCEDGKEKVG GFELGNVDGE LKEEGEAKRK 300 RISLQLDYDA VIIAWASHKS PWTTGHKPNL DPDQCWPECM GACGTELHYP YGELGGFGCH 360 PVMIDGGREA RVSRYREKRR TRLFSKKIRY EVRKLNAEKR PRMKGRFVKR ASFAAPTFPL 420 LNK

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MSSAKNVANA VGGKTARACD SCITKRARWY CAADDAFLCQ ACDSSVHSAN PLARRHERVR  60
LKTASFKSAE EQPNCAPSWH TKKARTPRHG KHSRNNNHHH FHLVPEVGSD EVNSHEENEE  120
QLLYRVPIFD PFVGELCSTS PPSSVAESES KGTKGSMTMS LSNVVLLGCE NHEMEGLHGL  180
LPSEVELAEF AADVESLLGR GLENECVGME ELGLVDAKEE CSVGSGKVKV EEEEGPAQVA  240
SRTCKVEADE VEMVGRDQSF EFSFDYDSLE TCEDGKEKVG GFELGNVDGE LKEEGEAKRK  300
RISLQLDYDA VIIAWASHKS PWTTGHKPNL DPDQCWPECM GACGTELHYP YGELGGFGCH  360
PVMIDGGREA RVSRYREKRR TRLFSKKIRY EVRKLNAEKR PRMKGRFVKR ASFAAPTFPL  420
LNK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	379	395	RRTRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	1e-103	CO-like family protein