PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027366968.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 184aa MW: 21075.1 Da PI: 6.9389 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 89.5 | 2.8e-28 | 104 | 162 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG+K+vk+s++ r+YY+C+s gC+vkk+ver+++d ++v++tYeg Hnhe XP_027366968.1 104 MDDGYKWRKYGKKSVKSSPNLRNYYKCSSGGCKVKKRVERDRDDSSYVITTYEGVHNHE 162 59********************************************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 184 aa Download sequence |
MEYYFENPHN PNHPNYAHSI DMVPSSSDFV LSDYLILDDF VDHQDSQSQS TESSEKATFS 60 DASHGFNDAT SRDNNIKCKS GIKRSKGEES PRIAFRTKSE LEIMDDGYKW RKYGKKSVKS 120 SPNLRNYYKC SSGGCKVKKR VERDRDDSSY VITTYEGVHN HECPFTTYYS QISVVHSDAF 180 ACTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G64810.1 | 2e-40 | WRKY family protein |