PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366868.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HSF

Protein Properties

Length: 398aa MW: 45283.3 Da PI: 4.6999

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366868.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.5	2.8e-35	14	105	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d+++++++sws++++sf+v+++ ef++++Lp++Fkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +g+ +ll++ XP_027366868.1 14 FLTKTYEMVDDPTTNSIVSWSASNKSFIVWNPPEFSRDLLPRFFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFANDDFIRGQPHLLKN 99 9******************999************************************9998.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_027366868.1 100 IHRRKP 105 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MEEAQGSSSS LPPFLTKTYE MVDDPTTNSI VSWSASNKSF IVWNPPEFSR DLLPRFFKHN 60 NFSSFIRQLN TYGFRKIDPE QWEFANDDFI RGQPHLLKNI HRRKPVHSHS LQNLQGQGAV 120 PLTESERQSF KDEIERLKHE KERLLLELQS HEQEGKMYEI QLQCSKDRLE KLENKQQHML 180 SSVSQMLQKP GIALNLLQLT ESMDRKRRLP RGGLFGDDAS IEDHMETSQI LPRENEESAS 240 TFTLSVERLD LLESSMVFWE NIAHEVGGDT FVQSHSNLGF DESTSCADSP AISCVQLDVE 300 IQPKSPGIDM NSEPAVAAAS DIDSSKEQPG VTAPVVTGVN DVFWEQFLTE NPGSTEMQEA 360 QSERKDSDGR NDGKTSELSR FWWNIRNVNN LPEQMGHS

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MEEAQGSSSS LPPFLTKTYE MVDDPTTNSI VSWSASNKSF IVWNPPEFSR DLLPRFFKHN  60
NFSSFIRQLN TYGFRKIDPE QWEFANDDFI RGQPHLLKNI HRRKPVHSHS LQNLQGQGAV  120
PLTESERQSF KDEIERLKHE KERLLLELQS HEQEGKMYEI QLQCSKDRLE KLENKQQHML  180
SSVSQMLQKP GIALNLLQLT ESMDRKRRLP RGGLFGDDAS IEDHMETSQI LPRENEESAS  240
TFTLSVERLD LLESSMVFWE NIAHEVGGDT FVQSHSNLGF DESTSCADSP AISCVQLDVE  300
IQPKSPGIDM NSEPAVAAAS DIDSSKEQPG VTAPVVTGVN DVFWEQFLTE NPGSTEMQEA  360
QSERKDSDGR NDGKTSELSR FWWNIRNVNN LPEQMGHS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	204	209	DRKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	1e-121	HSF family protein