PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366840.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 385aa MW: 42232.9 Da PI: 7.8567

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366840.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.3	5.5e-13	313	358	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L +AveYIk+Lq XP_027366840.1 313 SIAERERRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKDLQ 358 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MDSNTHQSYQ LNQPSSGLLR FRSAPTSLLS NLTPSVSSNS FWEGSESDKL ISRFVSSSND 60 TVAVASTSFE ENKDCSKALS VMNSQGYGVG GLPPHYPRHG SSATEGSYGM VGSMGMDHET 120 PHKGFGSSLL RQNSSPAGLF SNITFQNGFA TMKGVGNFCG VNGSNEVNPC INRLNNHISF 180 SSRSASSLGM LSQISEIGSE EIEATSPDDD RRQRGSNGDG QHYGHGFPYG SWNDTPQLSE 240 NLSGLKRGRT GNEKIFSDIQ NEEQGNQVNI LSHHLSLPKA SADMITMEKL LQFPDSVPCK 300 IRAKRGCATH PRSIAERERR TRISERMRKL QELVPNMDKQ TNTADMLDLA VEYIKDLQKQ 360 FKTLSEKRAN CKCINLQKAD THQIA

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MDSNTHQSYQ LNQPSSGLLR FRSAPTSLLS NLTPSVSSNS FWEGSESDKL ISRFVSSSND  60
TVAVASTSFE ENKDCSKALS VMNSQGYGVG GLPPHYPRHG SSATEGSYGM VGSMGMDHET  120
PHKGFGSSLL RQNSSPAGLF SNITFQNGFA TMKGVGNFCG VNGSNEVNPC INRLNNHISF  180
SSRSASSLGM LSQISEIGSE EIEATSPDDD RRQRGSNGDG QHYGHGFPYG SWNDTPQLSE  240
NLSGLKRGRT GNEKIFSDIQ NEEQGNQVNI LSHHLSLPKA SADMITMEKL LQFPDSVPCK  300
IRAKRGCATH PRSIAERERR TRISERMRKL QELVPNMDKQ TNTADMLDLA VEYIKDLQKQ  360
FKTLSEKRAN CKCINLQKAD THQIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	2e-57	bHLH family protein