PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027366644.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 22785.2 Da PI: 4.9109 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.9 | 1.1e-17 | 114 | 164 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp++ +r++lg+f ++ +Aaka++ a+ +++g XP_027366644.1 114 RYRGVRRRP-WGKFAAEIRDPRKK--GTRVWLGTFESEIDAAKAYDCAAFRMRG 164 7********.**********9653..3**********99*************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MTTAEETSSL KLLSQHLLGD TSDPFLTSLI SVKLEEDPSS ELDLDSNFSG QSTFCNLLEC 60 FGFEADAEVE VDGRNSHDVQ NSIAMSPSEE PQKSDLAETT VSGEKEATCY EGRRYRGVRR 120 RPWGKFAAEI RDPRKKGTRV WLGTFESEID AAKAYDCAAF RMRGQKAILN FPLEAGESHP 180 EPSSCGRKRR RDHTKDGSSS SYVMS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 187 | 191 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 2e-33 | ERF family protein |