PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027366598.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | NF-YC | ||||||||
Protein Properties | Length: 255aa MW: 28487.1 Da PI: 6.3406 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 176.6 | 2.5e-55 | 80 | 182 | 2 | 101 |
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93 l+sfw++q +ek+tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflv XP_027366598.1 80 LQSFWANQyqeVEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLV 174 89*****99899*********************************************************************************** PP NF-YC 94 divprdel 101 divpr++l XP_027366598.1 175 DIVPREDL 182 *****987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MDHQGNGQNP SMGVVGSAQQ LTYGSNPYQG SHITGSPGMV VASPGTIQST GQPGGTQLGQ 60 HQLAYQHMHQ QQQQQLQQRL QSFWANQYQE VEKVTDFKNH SLPLARIKKI MKADEDVRMI 120 SAEAPVIFAR ACEMFILELT LRSWNHTEEN KRRTLQKNDI AAAITRTDIF DFLVDIVPRE 180 DLKDEGLASM PRGTVPVTGP AEALPYCYMP PQHTQIGTTG VPVMVDPYAQ QSHLYNMAPQ 240 MWPQPPEQQQ SSPDH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 152 | 158 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 6e-79 | NF-YC family protein |