PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027366224.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GeBP

Protein Properties

Length: 394aa MW: 43966.4 Da PI: 4.5158

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027366224.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	117.8	5.9e-37	106	201	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfqrlw++eDei lLqG+++++a++g+s ++d+ fy+++k+++++ ++k+qlveK+rrLKkK+++ +k+ sgk++sf+++hdq +fe+s +iW XP_027366224.1 106 LFQRLWTDEDEIGLLQGFLEYTAQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVLTKITSGKDFSFKSPHDQATFEISCRIW 200 79********************************************************************************************* PP DUF573 97 g 97 XP_027366224.1 201 S 201 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MASHQNDAVF PEEDLDDDDE TLEDEEEEDE DDDVLCEPDE DDETEPSPST SSALAVVALA 60 APGSAVSEAD NVTIPTATIA VADSSPKRQR TEQIEEKKAL DDSRRLFQRL WTDEDEIGLL 120 QGFLEYTAQR GSSHHNDTAL FYDQIKSKLQ LGFNKNQLVE KLRRLKKKYR NVLTKITSGK 180 DFSFKSPHDQ ATFEISCRIW SNTGPITGPV EDDDEINLNP NPNPNFSHSM KSESMNEKRT 240 ASSRKRSRSR SEKRDMNDGS ALHKDNNCNS NNNNNNNNNK DNENCNGRHT LQGLIEETVR 300 GCLSPVLKEL LVSGGMGFRN PFGFGGRGGF ALNPMPMPMP MPLSLLNLGI GEIGGDDNWR 360 KQQILELEVY SKRLELVQHE IKVALEELRS AGGG

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MASHQNDAVF PEEDLDDDDE TLEDEEEEDE DDDVLCEPDE DDETEPSPST SSALAVVALA  60
APGSAVSEAD NVTIPTATIA VADSSPKRQR TEQIEEKKAL DDSRRLFQRL WTDEDEIGLL  120
QGFLEYTAQR GSSHHNDTAL FYDQIKSKLQ LGFNKNQLVE KLRRLKKKYR NVLTKITSGK  180
DFSFKSPHDQ ATFEISCRIW SNTGPITGPV EDDDEINLNP NPNPNFSHSM KSESMNEKRT  240
ASSRKRSRSR SEKRDMNDGS ALHKDNNCNS NNNNNNNNNK DNENCNGRHT LQGLIEETVR  300
GCLSPVLKEL LVSGGMGFRN PFGFGGRGGF ALNPMPMPMP MPLSLLNLGI GEIGGDDNWR  360
KQQILELEVY SKRLELVQHE IKVALEELRS AGGG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	250	KRSRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	3e-69	GeBP family protein