PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027365439.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 644aa MW: 71749.5 Da PI: 5.1077

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027365439.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.1	3.8e-14	451	497	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ XP_027365439.1 451 NHVLAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 497 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 644 aa Download sequence
MAAPLGSRLQ SMLQAAVQSV QWTYSLFWQL CPQQVILVWG DGYYNGAIKT RKTVQPMEVS 60 AEEASLQRSQ QLRELYESLS AGDTNPPTRR PCAALSPEDL TESEWFYLMC VSFSFPPDVG 120 LPGKAYARRQ HVWLTGANEV DSKTFSRAIL AKTVVCIPLL DGVVEFGTTE KVQEDLNFIQ 180 HVKSFFLDHH HPLPPKPALS EHSTSNPTSS SDHIPTVMYT VADPPPTHTI NQNDMDEDEE 240 EEEDEAESAS EDETGGHIAG PATTPDTAAE PSELMQLEMP EDIRVGSPND GSNNLDSDFH 300 LLAVSQTGNP SGQAESTRRW APIQDPLQVQ LPVSAPHPLE DLTQEDTHYS QTVSNILQNQ 360 FSRWTHSSPS VGYIPYSNLS AFAKWTTLAD HHFHAPVDGT NQWLLKYILF TVPYLHAKTP 420 DDNSPQNRDT AAADTARLRG KGTPQDELSA NHVLAERRRR EKLNERFIIL RSLVPFVTKM 480 DKASILGDTI EYVKQLRRKI QELEARNRQM EADATVQRTS SSSSKEQQRS GITVMEKRKV 540 RIVEGNGVKA KAVEVEASTS VQVSIIESDA LLELECPHRE GLLLDVMQML REVRIEVIGV 600 QSSLNNGVFV AELRAKVKEN ANGKKVSIVE VKRALNQIIP HSVD

Sequence ? help Back to Top

Protein Sequence Length: 644 aa Download sequence

MAAPLGSRLQ SMLQAAVQSV QWTYSLFWQL CPQQVILVWG DGYYNGAIKT RKTVQPMEVS  60
AEEASLQRSQ QLRELYESLS AGDTNPPTRR PCAALSPEDL TESEWFYLMC VSFSFPPDVG  120
LPGKAYARRQ HVWLTGANEV DSKTFSRAIL AKTVVCIPLL DGVVEFGTTE KVQEDLNFIQ  180
HVKSFFLDHH HPLPPKPALS EHSTSNPTSS SDHIPTVMYT VADPPPTHTI NQNDMDEDEE  240
EEEDEAESAS EDETGGHIAG PATTPDTAAE PSELMQLEMP EDIRVGSPND GSNNLDSDFH  300
LLAVSQTGNP SGQAESTRRW APIQDPLQVQ LPVSAPHPLE DLTQEDTHYS QTVSNILQNQ  360
FSRWTHSSPS VGYIPYSNLS AFAKWTTLAD HHFHAPVDGT NQWLLKYILF TVPYLHAKTP  420
DDNSPQNRDT AAADTARLRG KGTPQDELSA NHVLAERRRR EKLNERFIIL RSLVPFVTKM  480
DKASILGDTI EYVKQLRRKI QELEARNRQM EADATVQRTS SSSSKEQQRS GITVMEKRKV  540
RIVEGNGVKA KAVEVEASTS VQVSIIESDA LLELECPHRE GLLLDVMQML REVRIEVIGV  600
QSSLNNGVFV AELRAKVKEN ANGKKVSIVE VKRALNQIIP HSVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	456	461	ERRRRE
2	457	462	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	2e-98	bHLH family protein