PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027365102.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HSF
Protein Properties Length: 343aa    MW: 39852.9 Da    PI: 4.8972
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027365102.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.21.5e-34461372102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+++++ d+++++++sws++g+sfvv+d++ f++ +Lp+yFkh+nf+SFvRQLn+YgF+k++ ++         weF+++ F +g+ +ll++
  XP_027365102.1  46 FLTKTFDVVGDPTTNHVVSWSKDGTSFVVWDPHAFSTALLPRYFKHNNFSSFVRQLNTYGFRKIDPDR---------WEFANEGFMRGHSHLLRN 131
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_027365102.1 132 IRRRKA 137
                     ***986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MDYTYPVVKE EYLEPSSSYQ SGGEYTPMIP PPQPMEGLHD TGTPPFLTKT FDVVGDPTTN  60
HVVSWSKDGT SFVVWDPHAF STALLPRYFK HNNFSSFVRQ LNTYGFRKID PDRWEFANEG  120
FMRGHSHLLR NIRRRKAPSQ LAQDQQCVEV GRFRVDEEID RLRQDKRVLM MELVNLRQQQ  180
QNTRMCMMEM EQRLQGTEIK QQQMMAFLAR AIKNPAFVHQ LLQQKEKRKE LEEALTKKRR  240
RQIELGDSTT RSGGEGRSTV KVEPVEFGVS ELEMLAMEMQ GFGKEMVGQE EGVDRELDEE  300
FWEELLFSEK FEGRLDIPTA EDKDEDEDVN VLANQLGCLD SSH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1227241KRKELEEALTKKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.14e-95HSF family protein