PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027364954.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 509aa MW: 55401.7 Da PI: 5.7203

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027364954.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.3e-11	361	407	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ +I +Lq XP_027364954.1 361 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITFITDLQ 407 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MMGEKFCVNE EDKGVLESVL GADAVAFFIS AVSNNVFSGV VVPPPGADPA LRQRLCQLVE 60 VSKWNYAVFW QVAGLKSGGS ALIWGDGHCR DPKGGGAGGE RNVIGKEDDE EVRKKVLQKL 120 DACFAGSVSK EVNCARLDRV SDLHMFYLTS MCYIFGFDSP CGPGSSFKSA KSIWASDAAS 180 CLNQLESRSF LGKLAGLQTV VFVPLKSGVV ELGSLEMVPE DQGVVEMVRT AFGESSPGQA 240 KVFPKIFGHE LSLGDTKSQS ITISFSPKVE DDSGFTSDSY EVQALGVNHG YGNSSNGTLG 300 DSNEAKLFPQ LNQMIAGNFN PQARVPCLDL GNEDSCSTHA DERKPRKRGR KPANGREEPL 360 NHVEAERQRR EKLNQRFYAL RAVVPNISKM DKASLLGDAI TFITDLQMKI KVLETEKNMI 420 NNKDQKLSLP DIDFQAREDD AVLTVRCPLD IHPVSGVVKT FREHQVVAQE SSVSTTDDKV 480 IHTFSIRTQG GEAAAIQLKE KLEASLCNN

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MMGEKFCVNE EDKGVLESVL GADAVAFFIS AVSNNVFSGV VVPPPGADPA LRQRLCQLVE  60
VSKWNYAVFW QVAGLKSGGS ALIWGDGHCR DPKGGGAGGE RNVIGKEDDE EVRKKVLQKL  120
DACFAGSVSK EVNCARLDRV SDLHMFYLTS MCYIFGFDSP CGPGSSFKSA KSIWASDAAS  180
CLNQLESRSF LGKLAGLQTV VFVPLKSGVV ELGSLEMVPE DQGVVEMVRT AFGESSPGQA  240
KVFPKIFGHE LSLGDTKSQS ITISFSPKVE DDSGFTSDSY EVQALGVNHG YGNSSNGTLG  300
DSNEAKLFPQ LNQMIAGNFN PQARVPCLDL GNEDSCSTHA DERKPRKRGR KPANGREEPL  360
NHVEAERQRR EKLNQRFYAL RAVVPNISKM DKASLLGDAI TFITDLQMKI KVLETEKNMI  420
NNKDQKLSLP DIDFQAREDD AVLTVRCPLD IHPVSGVVKT FREHQVVAQE SSVSTTDDKV  480
IHTFSIRTQG GEAAAIQLKE KLEASLCNN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	343	351	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-156	bHLH family protein